50 Covid-19 Open Source Projects
Covid-19 has already become a major problem for everyone, for every country around the globe. It is a modern-time large-scale pandemic. Many parts of this world are currently in the middle of the fight to stop/limit spread of the virus and to minimize the resulting damage.
While there are still many uncertainties about how to mitigate the desease, many efforts have been initiated to accelerate drug finding, to contain the spread, to treat the patients, to establish better tools, etc. And this also happens at global scale involving government officials, volunteers, doctors, engineers, ordinary people..
In the following we list 50+ notable open source projects / repositories related to Covid-19, which might help kickstarting/ accelerating our effort.
Hopefully we can overcome this soon.
Update 04.04.2020, the list now contains 75 projects. Although the list could contain some repos for building ventilators and face shields, I made a dedicated list for that purpose. Access the list of Open Source Ventilator and Face Shield Projects here.
| AaronWard/covid-19-analysis | Covidify - corona virus report generation for python |
| aatishb/covid | Tracking Coronavirus Growth |
| ahmadawais/corona-cli | Track the Coronavirus disease (COVID-19) or the Novel Coronavirus Strain in the command line. Both worldwide for all countries, for one country, or for the US States. Fast response time (< 100ms). |
| AliasIO/wappalyzer | Cross-platform utility that uncovers the technologies used on websites. |
| beoutbreakprepared/nCoV2019 | Location for summaries and analysis of data related to n-CoV 2019, first reported in Wuhan, China |
| BlankerL/DXY-COVID-19-Data | 2019 |
| bneiluj/covid-19-open-source-ventilators | List of all Covid-19 Open Source Ventilator initiatives |
| BustByte/coronastatus | Join the fight! Open source webapp that let people report their health status to get overview of COVID-19 |
| closedloop-ai/cv19index | COVID-19 Vulnerability Index |
| CodeForPhilly/chime | COVID-19 Hospital Impact Model for Epidemics |
| coronasafe/care | Care is a single point to link Hospitals, Corona Care Centers and Volunteers to the unified Corona Safe Network so that the Kerala Chief Ministers Office has direct access to live reports of health data v/s our total. healthcare capacity |
| coronasafe/coronasafe.in | A crowd-sourced guide to staying safe in Coronavirus disease (COVID-19) outbreak. |
| COVID-19-electronic-health-system/Corona-tracker | A web application promoting accurate COVID-19 guidelines and tracking user symptoms |
| covid-19-net/covid-19-community | Community effort to build a Neo4j Knowledge Graph (KG) that links heterogeneous data about COVID-19 |
| covid19-dash/covid-dashboard | Help welcomed if you have expertise in public health web technology, data modeling and munging, or visualization. |
| covid19-data/covid19-data | COVID-19 workflows and datasets. |
| covid19india/covid19india-react | Source code of main website |
| covidatlas/coronadatascraper | COVID-19 Coronavirus data scraped from government and curated data sources. |
| CSSEGISandData/COVID-19 | Novel Coronavirus (COVID-19) Cases, provided by JHU CSSE |
| cwoomi/cert-covid19 | Informationssammlung zum Thema CoVid-19 |
| daenuprobst/covid19-cases-switzerland | Data from BAG Tweets made useful. |
| DataScienceResearchPeru/covid-19_latinoamerica | Daily report of cases confirmed per country in Latin America by DSRP and volunteers that we appreciate. Also we’re incorporating new variables (health infraestructure, weather, economic). Don’t forget to tap Star |
| datasets/covid-19 | Novel Coronavirus 2019 time series data on cases |
| deepset-ai/COVID-QA | API & Webapp to answer questions about COVID-19. Using NLP (Question Answering) and trusted, curated data sources. |
| dsfsi/covid19za | COVID 19 Data and Dashboard for South Africa |
| echen102/COVID-19-TweetIDs | The repository contains an ongoing collection of tweets IDs associated with the novel coronavirus COVID-19 (SARS-CoV-2), which commenced on January 28, 2020. |
| elcronos/COVID-19 | COVID-19 Detector from x-rays using Computer Vision and Deep Learning |
| ExpDev07/coronavirus-tracker-api | A simple and fast (< 200ms) API for tracking the global coronavirus (2019-nCoV) outbreak. It’s written in python using the Flask framework. |
| FoldingAtHome/coronavirus | Folding@home COVID-19 efforts |
| galaxyproject/SARS-CoV-2 | Initial analysis of COVID-19 data using Galaxy, BioConda and public research infrastructures |
| geohot/corona | Reverse engineering SARS-CoV-2 |
| github/covid19-dashboard | A site that displays up to date COVID-19 stats, powered by fastpages. |
| globalcitizen/2019-wuhan-coronavirus-data | 2019 Wuhan Coronavirus data (2019-nCoV) |
| hev-sw/hev-sw | Rapidly-producible ventilator developed with CERN and collaborating institutes for the COVID-19 pandemic |
| ieee8023/covid-chestxray-dataset | We are building an open database of COVID-19 cases with chest X-ray or CT images. |
| ImperialCollegeLondon/covid19model | Code for modelling estimated deaths and cases for COVID19. |
| Inspire-Poli-USP/Inspire-OpenLung | An another [IN PROGRESS] open source, low cost, low resource, quick deployment ventilator design that utilizes a Ambu-bag as a core component. ‘War’ against COVID-19 |
| iTaysonLab/gorkiy | JaDX decompile of com.askgps.personaltrackercore (Moscow COVID-19 person tracker). Note that I’m NOT related to the development of this app. |
| J535D165/CoronaWatchNL | RIVM reported numbers on the Coronavirus outbreak in The Netherlands |
| karpathy/covid-sanity | Aspires to help the influx of bioRxiv / medRxiv papers on COVID-19 |
| Lewuathe/COVID19-SIR | COVID-19 SIR model estimation |
| lindawangg/COVID-Net | COVID-Net model for COVID-19 detection on COVIDx dataset |
| mathdroid/covid-19-api | COVID-19 global data (from JHU CSSE for now) as-a-service |
| mattroconnor/deep_learning_coronavirus_cure | Using deep learning to generate novel molecules as candidates for binding with coronavirus protease |
| MhdHejazi/CoronaTracker | Coronavirus tracker app for iOS & macOS with maps & charts |
| midas-network/COVID-19 | 2019 novel coronavirus repository |
| mitmath/6S083 | Materials for MIT 6.S083 / 18.S190: Computational thinking with Julia + application to the COVID-19 pandemic |
| neherlab/covid19_scenarios | Models of COVID-19 outbreak trajectories and hospital demand |
| neherlab/covid19_scenarios_data | Data preprocessing scripts and preprocessed data storage for COVID-19 Scenarios project |
| nextstrain/ncov | Nextstrain build for novel coronavirus (nCoV) |
| NovelCOVID/API | API for Current cases and more stuff about COVID-19 or the Novel Coronavirus Strain |
| nytimes/covid-19-data | An ongoing repository of data on coronavirus cases and deaths in the U.S. |
| open-covid-19/data | Crowd-sourced COVID-19 data |
| openZH/covid_19 | COVID19 case numbers Cantons of Switzerland and Principality of Liechtenstein (FL) - case numbers include persons tested in the respective area. The data is updated at best once a day (times of collection and update may vary). Start with the README! Help closing the gaps: |
| oscarhealth/covid19-testing | COVID-19 Testing Site Finder with Risk Assessment |
| paulvangentcom/python_corona_simulation | An agent-based simulation of corona and other viruses in python |
| pennsignals/chime | COVID-19 Hospital Impact Model for Epidemics |
| pomber/covid19 | JSON time-series of coronavirus cases (confirmed, deaths and recovered) per country - updated daily |
| popsolutions/openventilator | OpenSource Ventilator for the COVID-19 crisis. We aim to provide a cheap and reliable solution for respiratory deseas and inaccesibility to this kind of ventilation medical equipment |
| PubInv/covid19-vent-list | A list projects to make emergency ventilators in response to COVID-19, focusing on free-libre open source |
| rizmaulana/kotlin-mvvm-covid19 | This repository contains simple COVID19 data monitoring with android stack MVVM, Live Data, Koin, RxJava, RxBinding, Offline first with simple caching, etc |
| sagarkarira/coronavirus-tracker-cli | Track conronavirus cases from command line. curl https://corona-stats.online/ |
| someshkar/covid19india-cluster | :microscope: COVID19 India Cluster Network |
| soroushchehresa/awesome-coronavirus | Useful projects and resources for COVID-19 (2019 novel Coronavirus) |
| sorxrob/covid-3d | An interactive 3D visualization of COVID-19. |
| splunk/corona_virus | This project includes an app that allows users to visualize and analyze information about COVID-19 using data made publicly-available by Johns Hopkins University. For more information on legal disclaimers, please see the README. |
| stevenliuyi/covid19 | an interactive, animated COVID-19 coronavirus map to track the outbreak over time by country and by region for selected countries (including China, Italy, Korea, Japan, France, Germany, United States) |
| TahirHafeez/SukhSaans | Open Source Pandemic Mechanical Ventilator using Ambu Bag & Arduino #Covid-19 |
| ThisIsIsaac/COVID-19_Korea_Dataset | COVID-19 Korea Dataset & Comprehensive Medical Dataset & visualizer |
| twiecki/covid19 | Analyses about the COVID-19 virus |
| UCSD-AI4H/COVID-CT | COVID-CT-Dataset: A CT Scan Dataset about COVID-19 |
| virtual-biohackathons/covid-19-bh20 | COVID-19 Biohackathon April 5-11 2020 |
| WarenGonzaga/covid19-tracker-cli | A curl-based command line tracker for Novel Coronavirus or COVID-19 pandemic. It Supports terminal for linux and macos, command prompt for windows, and termux for android with real-time updates. curl -L covid19.trackercli.com |
| willhaslett/covid-19-growth | Daily COVID-19 epidemiological data, piped into friendly Pandas dataframes, functions for dataset construction |
| Yu-Group/covid19-severity-prediction | Covid-19 severity prediction at the county-level + hospital-level. |